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Intron Name: Anas_platyrhynchos_platyrhynchos_2_116727258_116728790_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

116727258 - 116728790

Intron Length:

1533

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTGAGCTTT

5'SS Class:

strong_major

3'SS Sequence:

CTGTTTTGTTCAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

ATTTTAT

U12 Branch Point Sequence:

TAATAATTAATA

Flanking Amino Acid:

EMLSAALRTGDDYIAIGADE

Intron Amino Acid Position:

159

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

88.1

0.9

0.8

83.9

30.3

Major BPS

87.7

0.94

0.8

77.7

36.7

Major PPT

81.1

0.7

0.9

80.3

37.3

Minor 5ss

44.3

-0.6

3.1

64.1

47.4

Minor BPS

57.3

0.22

1.8

68.23

37.4

Associated Gene:

Gene:

TCEA1

Ensembl Gene ID:

ENSAPLG00000004621

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000004768

116721513 - 116749482

27970