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Intron Name: Anas_platyrhynchos_platyrhynchos_2_116738431_116743974_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

116738431 - 116743974

Intron Length:

5544

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTATGACTT

5'SS Class:

strong_major

3'SS Sequence:

ATTTCTGTTGCAG|T

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTTTAT

U12 Branch Point Sequence:

ATGTTTTTATTT

Flanking Amino Acid:

NIPMTLELLQSTRIGMSVNA

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

84.2

0.81

0.9

77.2

37.7

Major BPS

96.5

1.15

0.6

34.2

Major PPT

82.9

0.74

0.9

77.3

36.3

Minor 5ss

-0.7

3.1

65.1

46.1

Minor BPS

59.2

0.37

1.5

73.08

38.9

Associated Gene:

Gene:

TCEA1

Ensembl Gene ID:

ENSAPLG00000004621

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000004768

116721513 - 116749482

27970