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Intron Name: Anas_platyrhynchos_platyrhynchos_2_116744038_116749413_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

116744038 - 116749413

Intron Length:

5376

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GCG|GTGAGGCGC

5'SS Class:

major

3'SS Sequence:

TTCCTTTTTGCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TACTAAA

U12 Branch Point Sequence:

TGCTACTAAATT

Flanking Amino Acid:

MDKMVQKKNAAGALDLLKEL

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

73.2

0.55

55.2

43.9

Major BPS

77.5

0.68

0.8

76.2

24.6

Major PPT

91.4

0.93

0.6

87.5

22.7

Minor 5ss

26.1

-2.7

3.1

33.6

41.9

Minor BPS

0.27

1.9

73.41

43.7

Associated Gene:

Gene:

TCEA1

Ensembl Gene ID:

ENSAPLG00000004621

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000004768

116721513 - 116749482

27970