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Intron Name: Anas_platyrhynchos_platyrhynchos_2_117140291_117144485_F

Intron Information:

Intron Rank:

126397

Intron Class:

major

Intron Phase:

Intron Coordinates:

117140291 - 117144485

Intron Length:

4195

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CTG|GTAGGTATA

5'SS Class:

strong_major

3'SS Sequence:

CTTGATTTTGCAG|T

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TATTAAA

U12 Branch Point Sequence:

TTCTGCTTGATT

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

81.2

0.74

79.8

35.3

Major BPS

82.6

0.81

0.8

82.2

24.5

Major PPT

82.6

0.73

0.9

76.5

37.2

Minor 5ss

38.1

-1.3

3.1

47.2

43.7

Minor BPS

66.2

0.59

1.8

82.6

39.5

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000018105

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000029684

117139053 - 117144655

5603