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Intron Name: Anas_platyrhynchos_platyrhynchos_2_117506666_117508555_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

117506666 - 117508555

Intron Length:

1890

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAAGGTAA

5'SS Class:

strong_major

3'SS Sequence:

AATTTGTTAATAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

ATATAAT

U12 Branch Point Sequence:

ATTCACTTAATA

Flanking Amino Acid:

FYVKDDNGSTGEEQASEEEN

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

90.8

0.96

0.8

28.7

Major BPS

0.72

78.4

31.2

Major PPT

67.8

0.4

42.2

Minor 5ss

-1.6

3.3

46.2

49.1

Minor BPS

69.4

0.6

1.4

76.71

33.5

Associated Gene:

Gene:

TGS1

Ensembl Gene ID:

ENSAPLG00000006073

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000022140

117506027 - 117524029

18003

ENSAPLT00000006307

117506027 - 117532361

26335