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Intron Name: Anas_platyrhynchos_platyrhynchos_2_117512875_117513841_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

117512875 - 117513841

Intron Length:

967

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAAGTCAT

5'SS Class:

strong_major

3'SS Sequence:

TGTTTTTTCCTAG|C

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

AAATAAA

U12 Branch Point Sequence:

CAGAAATAAACT

Flanking Amino Acid:

PENRVAKVKRSHELDVDENP

Intron Amino Acid Position:

442

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

96.1

1.09

0.7

Major BPS

0.3

62.3

30.4

Major PPT

0.74

0.8

77.1

37.1

Minor 5ss

35.9

-1.6

49.5

46.7

Minor BPS

42.5

-0.4

56.12

45.4

Associated Gene:

Gene:

TGS1

Ensembl Gene ID:

ENSAPLG00000006073

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000022140

117506027 - 117524029

18003

ENSAPLT00000006307

117506027 - 117532361

26335