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Intron Name: Anas_platyrhynchos_platyrhynchos_2_117514353_117515808_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

117514353 - 117515808

Intron Length:

1456

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTGAGCTGT

5'SS Class:

strong_major

3'SS Sequence:

CTGACAATTCCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

ATCTCAC

U12 Branch Point Sequence:

TATCTGACAATT

Flanking Amino Acid:

SSQKNKTLKKVEEFLKQVNT

Intron Amino Acid Position:

529

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

85.4

0.84

0.9

74.8

38.1

Major BPS

76.2

0.65

0.9

77.4

26.5

Major PPT

66.5

0.37

55.5

43.5

Minor 5ss

40.1

-1.1

3.1

55.9

48.3

Minor BPS

41.8

-0.5

2.3

63.61

40.6

Associated Gene:

Gene:

TGS1

Ensembl Gene ID:

ENSAPLG00000006073

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000022140

117506027 - 117524029

18003

ENSAPLT00000006307

117506027 - 117532361

26335