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Intron Name: Anas_platyrhynchos_platyrhynchos_2_117516161_117517040_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

117516161 - 117517040

Intron Length:

880

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTATTCCTA

5'SS Class:

major

3'SS Sequence:

CAGTGTCTTCCAG|T

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TAGTTAA

U12 Branch Point Sequence:

TAATAGTTAACT

Flanking Amino Acid:

LREETEDVSPVVDEKNTTKK

Intron Amino Acid Position:

646

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

71.1

0.5

1.1

63.5

42.4

Major BPS

64.3

0.36

1.2

55.7

41.6

Major PPT

72.1

0.5

61.8

44.2

Minor 5ss

47.6

-0.2

2.8

65.3

45.9

Minor BPS

0.33

2.2

79.47

41.9

Associated Gene:

Gene:

TGS1

Ensembl Gene ID:

ENSAPLG00000006073

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000022140

117506027 - 117524029

18003

ENSAPLT00000006307

117506027 - 117532361

26335