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Intron Name: Anas_platyrhynchos_platyrhynchos_2_117519943_117520969_F

Intron Information:

Intron Rank:

Intron Class:

minor

Intron Phase:

Intron Coordinates:

117519943 - 117520969

Intron Length:

1027

Sequence Information:

Terminal Dinucleotides:

AT-AC

5'SS Sequence:

TGG|ATATCCTTT

5'SS Class:

strong_minor

3'SS Sequence:

TACTGGCTTCTAC|A

3'SS Class:

strong_BPS

U2 Branch Point Sequence:

TATCCAT

U12 Branch Point Sequence:

TTTTCCTTTACT

Flanking Amino Acid:

FDIQTMICPDGFEIFRLSKK

Intron Amino Acid Position:

824

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

34.7

-0.9

3.4

53.2

46.3

Major BPS

69.5

0.49

1.2

78.7

34.9

Major PPT

39.4

-0.6

3.2

50.7

43.6

Minor 5ss

96.6

1.55

0.8

90.9

28.7

Minor BPS

86.3

1.23

1.4

100.6

26.7

Associated Gene:

Gene:

TGS1

Ensembl Gene ID:

ENSAPLG00000006073

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000022140

117506027 - 117524029

18003

ENSAPLT00000006307

117506027 - 117532361

26335