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Intron Name: Anas_platyrhynchos_platyrhynchos_2_117620261_117621537_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

117620261 - 117621537

Intron Length:

1277

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTATGACTT

5'SS Class:

strong_major

3'SS Sequence:

TTTCTTTTTTCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTAGAC

U12 Branch Point Sequence:

TTTAGACAAATT

Flanking Amino Acid:

EFIAEQEKVEDRESKILQLE

Intron Amino Acid Position:

640

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

84.2

0.81

0.9

77.2

37.7

Major BPS

69.3

0.48

1.1

66.7

Major PPT

96.4

1.04

0.5

95.9

14.1

Minor 5ss

-0.7

3.1

65.1

46.1

Minor BPS

40.5

-0.6

2.4

66.49

44.2

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000007004

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000007268

117616742 - 117640285

23544