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Intron Name: Anas_platyrhynchos_platyrhynchos_2_117623680_117624343_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

117623680 - 117624343

Intron Length:

664

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTAGATAAA

5'SS Class:

major

3'SS Sequence:

ATGTTAAATTTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTCTGAA

U12 Branch Point Sequence:

TTTTTCTGAACT

Flanking Amino Acid:

EVDITILSHEDLLKTTESLK

Intron Amino Acid Position:

538

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

78.5

0.67

76.5

34.2

Major BPS

82.1

0.8

71.6

36.4

Major PPT

64.3

0.32

61.4

43.4

Minor 5ss

-1.9

41.3

45.3

Minor BPS

82.4

1.1

1.2

96.74

27.7

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000007004

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000007268

117616742 - 117640285

23544