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© 2019-2022 Kanadia Lab,
PNB, Uconn

Construction by: Audrey Weber

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Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_2_117822225_117822965_R

Intron Information:

Intron Rank:
1
Intron Class:
major
Intron Phase:
2
Intron Coordinates:
117822225 - 117822965
Intron Length:
741

Sequence Information:

Terminal Dinucleotides:
GT-AG
5'SS Sequence:
TGA|GTGAGTGAG
5'SS Class:
major
3'SS Sequence:
CCCCTTCCCGTAG|C
3'SS Class:
major_PPT
U2 Branch Point Sequence:
GTCTGAC
U12 Branch Point Sequence:
TCTCTCTCCCCT
Flanking Amino Acid:
NPPGAPRGGSDPMALLLRLG
Intron Amino Acid Position:
207

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev
Major 5ss
70.7
0.49
1
62.1
38.7
Major BPS
63.7
0.34
1.2
57
41.8
Major PPT
69.6
0.44
0.7
64.8
23.8
Minor 5ss
27.9
-2.5
3
27.6
37.5
Minor BPS
36.3
-0.9
3.5
64.73
45.8

Associated Gene:

Gene:
PENK
Ensembl Gene ID:
ENSAPLG00000007565
Chromosome:
2

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length
ENSAPLT00000007844
117818581 - 117823638
5058