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Intron Name: Anas_platyrhynchos_platyrhynchos_2_117831300_117831902_R

Intron Information:

Intron Rank:

135881

Intron Class:

major

Intron Phase:

Intron Coordinates:

117831300 - 117831902

Intron Length:

603

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ATG|GTAAGCTTG

5'SS Class:

strong_major

3'SS Sequence:

TCTCTGTTTTCAG|T

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

AAAAAAA

U12 Branch Point Sequence:

AAAAAAGGAACA

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

82.1

0.76

71.5

41.1

Major BPS

47.9

-0.1

0.9

51.7

28.4

Major PPT

86.2

0.81

0.8

83.9

31.1

Minor 5ss

47.6

-0.2

2.8

61.4

44.4

Minor BPS

36.1

-1

2.1

44.64

36.2

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000020509

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000047085

117831116 - 117836728

5613