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Intron Name: Anas_platyrhynchos_platyrhynchos_2_117878165_117880739_R

Intron Information:

Intron Rank:

136905

Intron Class:

major

Intron Phase:

Intron Coordinates:

117878165 - 117880739

Intron Length:

2575

Sequence Information:

Terminal Dinucleotides:

GC-AG

5'SS Sequence:

CAG|GCAAGTGTG

5'SS Class:

strong_major

3'SS Sequence:

GTTTTCTCCCCAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTCAGAT

U12 Branch Point Sequence:

AAATTCAGATCA

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

98.9

1.15

0.7

89.3

28.6

Major BPS

74.1

0.6

38.9

Major PPT

81.5

0.71

0.8

73.7

36.9

Minor 5ss

-2.8

4.1

39.6

46.4

Minor BPS

43.9

-0.4

1.8

53.9

37.6

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000021158

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000035272

117877637 - 117881335

3699