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Intron Name: Anas_platyrhynchos_platyrhynchos_2_118435867_118437142_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

5UTR

Intron Coordinates:

118435867 - 118437142

Intron Length:

1276

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GGG|GTAAGGCAT

5'SS Class:

strong_major

3'SS Sequence:

TCCACAATTGCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TACTCAT

U12 Branch Point Sequence:

TCTTCCACAATT

Flanking Amino Acid:

5UTR

Intron Amino Acid Position:

5UTR

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

80.1

0.71

69.6

42.7

Major BPS

87.1

0.92

0.7

85.9

22.5

Major PPT

70.1

0.45

0.9

62.5

37.3

Minor 5ss

-2.1

3.4

39.2

46.1

Minor BPS

61.4

0.44

1.8

81.26

40.6

Associated Gene:

Gene:

UBXN2B

Ensembl Gene ID:

ENSAPLG00000007644

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000033284

118433640 - 118469375

35736