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Intron Name: Anas_platyrhynchos_platyrhynchos_2_118435867_118438304_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

118435867 - 118438304

Intron Length:

2438

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GGG|GTAAGGCAT

5'SS Class:

strong_major

3'SS Sequence:

ATTTTCTTGGCAG|T

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTTCAT

U12 Branch Point Sequence:

TCACCCTTAAAC

Flanking Amino Acid:

TKMNSSKVSQGLKIDSFRSL

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

80.1

0.71

69.6

42.7

Major BPS

100

1.24

0.5

100

Major PPT

80.4

0.68

77.6

36.1

Minor 5ss

-2.1

3.4

39.2

46.1

Minor BPS

67.8

0.54

1.4

70.43

40.2

Associated Gene:

Gene:

UBXN2B

Ensembl Gene ID:

ENSAPLG00000007644

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000018339

118433640 - 118478590

44951

ENSAPLT00000007954

118433640 - 118451968

18329

ENSAPLT00000032904

118433640 - 118451069

17430