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Intron Name: Anas_platyrhynchos_platyrhynchos_2_118444801_118446323_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

118444801 - 118446323

Intron Length:

1523

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAAAAATC

5'SS Class:

strong_major

3'SS Sequence:

TTTTATCCTCTAG|C

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTTTAT

U12 Branch Point Sequence:

TTTTTTTTATCC

Flanking Amino Acid:

AFSGEGQKLGSLTPEIVSTP

Intron Amino Acid Position:

264

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

84.1

0.8

0.9

81.4

30.4

Major BPS

96.5

1.15

0.6

34.2

Major PPT

82.2

0.73

0.8

74.8

35.9

Minor 5ss

37.4

-1.4

3.2

51.9

44.9

Minor BPS

71.4

0.65

1.5

81.41

33.2

Associated Gene:

Gene:

UBXN2B

Ensembl Gene ID:

ENSAPLG00000007644

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000007954

118433640 - 118451968

18329

ENSAPLT00000033284

118433640 - 118469375

35736

ENSAPLT00000032904

118433640 - 118451069

17430

ENSAPLT00000018339

118433640 - 118478590

44951