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Intron Name: Anas_platyrhynchos_platyrhynchos_2_118446486_118450204_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

118446486 - 118450204

Intron Length:

3719

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAAATTGA

5'SS Class:

strong_major

3'SS Sequence:

ATCCTTTCTACAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTTCAT

U12 Branch Point Sequence:

ATGTCCATATCC

Flanking Amino Acid:

RLIQRFNQAHRIKDIRDFII

Intron Amino Acid Position:

318

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

86.1

0.85

0.9

77.4

33.8

Major BPS

100

1.24

0.5

100

Major PPT

82.2

0.72

0.8

76.3

31.7

Minor 5ss

38.9

-1.2

2.9

49.9

46.3

Minor BPS

56.4

0.18

1.9

69.9

41.3

Associated Gene:

Gene:

UBXN2B

Ensembl Gene ID:

ENSAPLG00000007644

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000018339

118433640 - 118478590

44951

ENSAPLT00000007954

118433640 - 118451968

18329

ENSAPLT00000033284

118433640 - 118469375

35736

ENSAPLT00000032904

118433640 - 118451069

17430