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Intron Name: Anas_platyrhynchos_platyrhynchos_2_118513123_118513565_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

118513123 - 118513565

Intron Length:

443

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CCG|GTATGTTGG

5'SS Class:

major

3'SS Sequence:

CTCTTTTGCACAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTCTT

U12 Branch Point Sequence:

CTCTTTTGCACA

Flanking Amino Acid:

GTVFDAAFSPDSRHLLSAGE

Intron Amino Acid Position:

815

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

76.7

0.63

62.7

44.2

Major BPS

39.5

-0.6

4.3

85.7

34.9

Major PPT

78.5

0.64

0.9

74.8

33.6

Minor 5ss

46.2

-0.4

2.5

58.1

46.4

Minor BPS

47.1

-0.2

1.9

58.67

41.9

Associated Gene:

Gene:

NSMAF

Ensembl Gene ID:

ENSAPLG00000008911

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000029046

118512735 - 118547818

35084

ENSAPLT00000009340

118511223 - 118547818

36596

ENSAPLT00000041770

118511223 - 118545156

33934