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Intron Name: Anas_platyrhynchos_platyrhynchos_2_118515471_118515715_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

118515471 - 118515715

Intron Length:

245

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TAT|GTGTGTATT

5'SS Class:

major

3'SS Sequence:

CCCTTCCTACTAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CTTTTAT

U12 Branch Point Sequence:

GCTTTTATAACC

Flanking Amino Acid:

TVISSSWDNHIYFYSIAFGR

Intron Amino Acid Position:

695

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

75.6

0.6

81.6

31.2

Major BPS

84.1

0.85

0.9

75.3

39.4

Major PPT

68.9

0.43

0.8

62.5

33.3

Minor 5ss

44.7

-0.6

2.8

40.7

Minor BPS

58.9

0.26

1.6

67.26

38.5

Associated Gene:

Gene:

NSMAF

Ensembl Gene ID:

ENSAPLG00000008911

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000041770

118511223 - 118545156

33934

ENSAPLT00000029046

118512735 - 118547818

35084

ENSAPLT00000009340

118511223 - 118547818

36596