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Intron Name: Anas_platyrhynchos_platyrhynchos_2_118517529_118518181_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

118517529 - 118518181

Intron Length:

653

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTGAGTATT

5'SS Class:

strong_major

3'SS Sequence:

CCATTATCCTTAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CCATTAT

U12 Branch Point Sequence:

TGTCCATTATCC

Flanking Amino Acid:

NGSSVFTTSQDSTLKMFSKE

Intron Amino Acid Position:

650

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

95.7

1.08

0.6

12.4

Major BPS

59.8

0.24

1.2

51.6

42.3

Major PPT

68.4

0.41

0.8

66.2

34.5

Minor 5ss

36.2

-1.6

2.9

50.6

45.9

Minor BPS

55.7

0.16

1.9

70.41

40.2

Associated Gene:

Gene:

NSMAF

Ensembl Gene ID:

ENSAPLG00000008911

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000029046

118512735 - 118547818

35084

ENSAPLT00000009340

118511223 - 118547818

36596

ENSAPLT00000041770

118511223 - 118545156

33934