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Intron Name: Anas_platyrhynchos_platyrhynchos_2_118518241_118519550_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

118518241 - 118519550

Intron Length:

1310

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AGA|GTAGGTACT

5'SS Class:

major

3'SS Sequence:

TTGTATTAAACAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTAAAAC

U12 Branch Point Sequence:

TTGTATTAAACA

Flanking Amino Acid:

KLDEQYKIHKEAITGIAVTS

Intron Amino Acid Position:

630

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

68.3

0.43

1.1

69.1

41.8

Major BPS

60.7

0.27

1.1

67.6

34.6

Major PPT

70.4

0.46

1.1

66.7

42.9

Minor 5ss

38.2

-1.3

3.1

48.4

41.4

Minor BPS

58.1

0.25

1.9

71.81

40.6

Associated Gene:

Gene:

NSMAF

Ensembl Gene ID:

ENSAPLG00000008911

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000041770

118511223 - 118545156

33934

ENSAPLT00000029046

118512735 - 118547818

35084

ENSAPLT00000009340

118511223 - 118547818

36596