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Intron Name: Anas_platyrhynchos_platyrhynchos_2_118524768_118524896_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

118524768 - 118524896

Intron Length:

129

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTTTGTTTA

5'SS Class:

major

3'SS Sequence:

ACATGTTGTCTAG|T

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTAACAA

U12 Branch Point Sequence:

TTTGGTTTAACA

Flanking Amino Acid:

KFDHADRTFNSLAETWKNCL

Intron Amino Acid Position:

425

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

77.8

0.66

1.1

77.9

32.4

Major BPS

61.8

0.29

1.1

69.7

35.6

Major PPT

62.8

0.29

54.5

45.1

Minor 5ss

46.2

-0.4

2.4

58.8

45.7

Minor BPS

65.7

0.49

1.9

78.6

38.6

Associated Gene:

Gene:

NSMAF

Ensembl Gene ID:

ENSAPLG00000008911

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000029046

118512735 - 118547818

35084

ENSAPLT00000009340

118511223 - 118547818

36596

ENSAPLT00000041770

118511223 - 118545156

33934