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Intron Name: Anas_platyrhynchos_platyrhynchos_2_118525145_118526500_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

118525145 - 118526500

Intron Length:

1356

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TTG|GTATGTATA

5'SS Class:

strong_major

3'SS Sequence:

TCTCTTGTTGCAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TATTAAA

U12 Branch Point Sequence:

TGATATTAAACA

Flanking Amino Acid:

LNKERLDRLLTRYQEMPEPK

Intron Amino Acid Position:

374

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.78

0.9

81.5

31.6

Major BPS

82.6

0.81

0.8

82.2

24.5

Major PPT

84.8

0.78

0.8

79.9

32.1

Minor 5ss

45.5

-0.5

2.5

56.3

43.3

Minor BPS

53.2

0.1

1.8

65.94

40.2

Associated Gene:

Gene:

NSMAF

Ensembl Gene ID:

ENSAPLG00000008911

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000041770

118511223 - 118545156

33934

ENSAPLT00000029046

118512735 - 118547818

35084

ENSAPLT00000009340

118511223 - 118547818

36596