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Intron Name: Anas_platyrhynchos_platyrhynchos_2_118529607_118530474_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

118529607 - 118530474

Intron Length:

868

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CTG|GTAAGCTCA

5'SS Class:

strong_major

3'SS Sequence:

TTTAACTTCTAAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTCAAT

U12 Branch Point Sequence:

TCCCCTTTAACT

Flanking Amino Acid:

YKRRHGLMPLGLEVFCTEND

Intron Amino Acid Position:

252

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

81.7

0.75

70.3

36.4

Major BPS

76.9

0.67

1.2

31.9

Major PPT

68.6

0.42

1.1

37.8

Minor 5ss

44.3

-0.6

2.8

53.8

44.4

Minor BPS

0.83

1.2

80.9

41.2

Associated Gene:

Gene:

NSMAF

Ensembl Gene ID:

ENSAPLG00000008911

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000029046

118512735 - 118547818

35084

ENSAPLT00000009340

118511223 - 118547818

36596

ENSAPLT00000041770

118511223 - 118545156

33934