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Intron Name: Anas_platyrhynchos_platyrhynchos_2_118532775_118535144_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

118532775 - 118535144

Intron Length:

2370

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AGA|GTAAGTATG

5'SS Class:

major

3'SS Sequence:

CCTTTGGTTTTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTAAA

U12 Branch Point Sequence:

TTAAACTTACTT

Flanking Amino Acid:

NIIAPYKTVRGTTEHLFQLD

Intron Amino Acid Position:

127

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

77.7

0.65

75.5

40.6

Major BPS

90.4

0.7

90.2

19.3

Major PPT

75.1

0.56

0.9

72.6

37.6

Minor 5ss

40.6

-1

2.8

48.1

41.6

Minor BPS

54.7

0.23

1.8

74.74

41.9

Associated Gene:

Gene:

NSMAF

Ensembl Gene ID:

ENSAPLG00000008911

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000041770

118511223 - 118545156

33934

ENSAPLT00000029046

118512735 - 118547818

35084

ENSAPLT00000009340

118511223 - 118547818

36596