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Intron Name: Anas_platyrhynchos_platyrhynchos_2_118538028_118538113_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

118538028 - 118538113

Intron Length:

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TCG|GTATGTGAA

5'SS Class:

major

3'SS Sequence:

ATTTACATTTTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTAAAT

U12 Branch Point Sequence:

ATCACTTTAAAT

Flanking Amino Acid:

EDNEANNPFTRETSGGISVV

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

78.9

0.68

70.6

35.2

Major BPS

82.3

0.8

0.9

87.6

25.7

Major PPT

75.2

0.57

0.9

71.9

38.2

Minor 5ss

38.6

-1.3

3.1

48.8

47.3

Minor BPS

65.2

0.56

1.4

76.36

40.1

Associated Gene:

Gene:

NSMAF

Ensembl Gene ID:

ENSAPLG00000008911

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000029046

118512735 - 118547818

35084

ENSAPLT00000009340

118511223 - 118547818

36596

ENSAPLT00000041770

118511223 - 118545156

33934