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Intron Name: Anas_platyrhynchos_platyrhynchos_2_118548295_118548569_F

Intron Information:

Intron Rank:

136534

Intron Class:

major

Intron Phase:

Intron Coordinates:

118548295 - 118548569

Intron Length:

275

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTAGGAAAA

5'SS Class:

strong_major

3'SS Sequence:

ATTTGTCTTTCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

AATTGAT

U12 Branch Point Sequence:

ATGCTAAGAATT

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.78

76.9

33.7

Major BPS

79.8

0.74

0.9

69.4

37.7

Major PPT

84.9

0.79

0.8

81.7

35.4

Minor 5ss

31.4

-2.1

3.1

39.2

46.2

Minor BPS

42.3

-0.5

1.8

58.86

37.9

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000023563

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000020684

118548203 - 118569411

21209