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Intron Name: Anas_platyrhynchos_platyrhynchos_2_118711166_118788321_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

5UTR

Intron Coordinates:

118711166 - 118788321

Intron Length:

77156

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TTG|GTGAGTGGG

5'SS Class:

strong_major

3'SS Sequence:

ATTTCCTTTGCAG|T

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TATTCAA

U12 Branch Point Sequence:

TTTACTATTATT

Flanking Amino Acid:

5UTR

Intron Amino Acid Position:

5UTR

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

81.1

0.73

0.9

64.9

41.1

Major BPS

0.82

0.8

83.9

25.3

Major PPT

0.83

0.7

81.4

29.7

Minor 5ss

26.8

-2.7

28.2

38.6

Minor BPS

51.6

0.13

1.9

77.6

38.7

Associated Gene:

Gene:

TOX

Ensembl Gene ID:

ENSAPLG00000009552

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000021281

118602645 - 118788409

185765