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Intron Name: Anas_platyrhynchos_platyrhynchos_2_11910413_11911830_R

Intron Information:

Intron Rank:

130410

Intron Class:

major

Intron Phase:

Intron Coordinates:

11910413 - 11911830

Intron Length:

1418

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GTG|GTAAGTGGA

5'SS Class:

strong_major

3'SS Sequence:

TTCTTCCTTTTAG|C

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

AATTAAA

U12 Branch Point Sequence:

ATTAAACTAATT

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

86.9

0.87

0.9

74.2

36.5

Major BPS

73.8

0.59

0.9

26.8

Major PPT

86.3

0.82

0.6

85.3

22.1

Minor 5ss

32.2

-2

3.1

37.6

42.2

Minor BPS

46.6

-0.1

70.75

39.5

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000017423

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000032914

11910241 - 11924226

13986

ENSAPLT00000020126

11910241 - 11942570

32330