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Intron Name: Anas_platyrhynchos_platyrhynchos_2_119152199_119153261_R

Intron Information:

Intron Rank:

142952

Intron Class:

major

Intron Phase:

Intron Coordinates:

119152199 - 119153261

Intron Length:

1063

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAGGCAAA

5'SS Class:

strong_major

3'SS Sequence:

TTTTTTTTTCCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TAGTGAT

U12 Branch Point Sequence:

TAAAGTGGAAAA

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

81.2

0.74

74.1

38.3

Major BPS

73.5

0.58

1.2

63.4

44.3

Major PPT

98.2

1.08

0.5

92.3

26.6

Minor 5ss

37.3

-1.4

3.1

47.6

48.1

Minor BPS

35.8

-1

2.2

44.34

37.4

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000024245

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000019099

119151817 - 119154008

2192