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Intron Name: Anas_platyrhynchos_platyrhynchos_2_119200863_119202227_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

119200863 - 119202227

Intron Length:

1365

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAAGGCAT

5'SS Class:

strong_major

3'SS Sequence:

TTCATTTTTTCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TATTCAT

U12 Branch Point Sequence:

TTTGTATTCATT

Flanking Amino Acid:

TEILQDIQYKGKSKTIPCFN

Intron Amino Acid Position:

187

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

89.8

0.94

0.9

78.6

37.2

Major BPS

92.2

1.05

0.7

91.9

19.6

Major PPT

89.4

0.89

0.7

29.2

Minor 5ss

32.4

-2

3.4

46.7

48.6

Minor BPS

49.4

0.03

2.1

76.06

41.3

Associated Gene:

Gene:

CA8

Ensembl Gene ID:

ENSAPLG00000005583

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000038190

119182957 - 119206817

23861

ENSAPLT00000026961

119182957 - 119225369

42413

ENSAPLT00000005789

119182957 - 119229442

46486