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Intron Name: Anas_platyrhynchos_platyrhynchos_2_119202291_119204698_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

119202291 - 119204698

Intron Length:

2408

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAGGTTTA

5'SS Class:

strong_major

3'SS Sequence:

TGTTGTATTTCAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

AATTCAT

U12 Branch Point Sequence:

AAACACTGAAAT

Flanking Amino Acid:

GIAIIALFVQIGKEHVGLKA

Intron Amino Acid Position:

166

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

88.3

0.9

84.1

30.2

Major BPS

83.4

0.83

0.8

83.7

25.7

Major PPT

81.3

0.7

0.9

78.1

40.1

Minor 5ss

42.4

-0.8

3.1

57.6

47.1

Minor BPS

47.5

-0.1

1.7

62.45

39.9

Associated Gene:

Gene:

CA8

Ensembl Gene ID:

ENSAPLG00000005583

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000038190

119182957 - 119206817

23861

ENSAPLT00000026961

119182957 - 119225369

42413

ENSAPLT00000005789

119182957 - 119229442

46486