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Intron Name: Anas_platyrhynchos_platyrhynchos_2_119204795_119206598_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

119204795 - 119206598

Intron Length:

1804

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTCAGGGTT

5'SS Class:

major

3'SS Sequence:

TGCTTTGTTTTAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTCAC

U12 Branch Point Sequence:

ATTTCTCTATTT

Flanking Amino Acid:

PAAGSPFLLQLHLMHWNSTL

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

77.2

0.64

1.3

76.9

38.6

Major BPS

90.1

0.99

0.7

91.6

20.3

Major PPT

78.3

0.64

0.9

76.8

37.4

Minor 5ss

30.6

-2.2

3.6

46.9

48.5

Minor BPS

56.1

0.27

1.9

78.83

37.8

Associated Gene:

Gene:

CA8

Ensembl Gene ID:

ENSAPLG00000005583

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000038190

119182957 - 119206817

23861