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Intron Name: Anas_platyrhynchos_platyrhynchos_2_119319974_119330725_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

119319974 - 119330725

Intron Length:

10752

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTAACTTTG

5'SS Class:

strong_major

3'SS Sequence:

TCCCTTGTTTTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TGTTTAC

U12 Branch Point Sequence:

ACTTGTTTACTA

Flanking Amino Acid:

SAKTASNVEEAFINTAKEIY

Intron Amino Acid Position:

154

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

83.1

0.78

1.1

78.8

38.3

Major BPS

71.4

0.53

1.1

63.4

Major PPT

77.5

0.62

0.8

76.1

32.5

Minor 5ss

49.4

-0

2.5

66.9

44.4

Minor BPS

48.6

-0.1

60.51

40.7

Associated Gene:

Gene:

RAB2A

Ensembl Gene ID:

ENSAPLG00000005615

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000044303

119286797 - 119333317

46521

ENSAPLT00000005821

119286321 - 119333317

46997