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Intron Name: Anas_platyrhynchos_platyrhynchos_2_119330795_119333018_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

119330795 - 119333018

Intron Length:

2224

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTAAGTTTT

5'SS Class:

strong_major

3'SS Sequence:

AACTTCATTTCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TAATCAT

U12 Branch Point Sequence:

GTGTATTGAACT

Flanking Amino Acid:

QEGVFDINNEANGIKIGPQH

Intron Amino Acid Position:

177

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

99.2

1.16

0.6

9.5

Major BPS

80.4

0.76

80.3

31.8

Major PPT

0.56

0.9

70.9

38.8

Minor 5ss

46.1

-0.4

2.8

66.9

44.4

Minor BPS

58.4

0.34

1.7

74.76

41.7

Associated Gene:

Gene:

RAB2A

Ensembl Gene ID:

ENSAPLG00000005615

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000044303

119286797 - 119333317

46521

ENSAPLT00000005821

119286321 - 119333317

46997