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Intron Name: Anas_platyrhynchos_platyrhynchos_2_119430309_119435121_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

119430309 - 119435121

Intron Length:

4813

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAAAACAA

5'SS Class:

strong_major

3'SS Sequence:

TCTTTTCTTATAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTTAAT

U12 Branch Point Sequence:

AGTGTTTTAATT

Flanking Amino Acid:

IMSSRSVKKKMENGEEVEVE

Intron Amino Acid Position:

817

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

80.8

0.73

70.2

35.7

Major BPS

99.5

1.23

0.5

98.2

4.2

Major PPT

88.2

0.86

0.6

84.2

Minor 5ss

30.6

-2.2

3.1

38.6

46.4

Minor BPS

63.9

0.52

1.3

74.04

37.5

Associated Gene:

Gene:

CHD7

Ensembl Gene ID:

ENSAPLG00000005873

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000006263

119349278 - 119475485

126208