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Intron Name: Anas_platyrhynchos_platyrhynchos_2_119438538_119439343_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

119438538 - 119439343

Intron Length:

806

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTAAACAGA

5'SS Class:

strong_major

3'SS Sequence:

TATCTTAACAAAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTTAT

U12 Branch Point Sequence:

TTTATCTTAACA

Flanking Amino Acid:

FSRSTDDNGEPVTHYLVKWC

Intron Amino Acid Position:

902

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

80.1

0.71

71.3

40.5

Major BPS

96.5

1.15

0.6

34.2

Major PPT

0.23

1.1

60.9

38.1

Minor 5ss

38.1

-1.3

49.1

46.7

Minor BPS

82.9

1.03

1.1

87.91

29.1

Associated Gene:

Gene:

CHD7

Ensembl Gene ID:

ENSAPLG00000005873

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000006263

119349278 - 119475485

126208