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Intron Name: Anas_platyrhynchos_platyrhynchos_2_119439482_119439577_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

119439482 - 119439577

Intron Length:

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GTG|GTAAGAATT

5'SS Class:

strong_major

3'SS Sequence:

GTATTTGAAACAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

ATTTGAA

U12 Branch Point Sequence:

TGTATTTGAAAC

Flanking Amino Acid:

MSREPEMERVERPPADDWKK

Intron Amino Acid Position:

948

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

87.2

0.88

0.8

86.3

28.9

Major BPS

78.4

0.71

0.9

69.4

37.7

Major PPT

63.4

0.3

1.1

58.9

45.3

Minor 5ss

39.6

-1.2

3.2

55.5

42.8

Minor BPS

-0

1.5

61.86

36.9

Associated Gene:

Gene:

CHD7

Ensembl Gene ID:

ENSAPLG00000005873

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000006263

119349278 - 119475485

126208