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Intron Name: Anas_platyrhynchos_platyrhynchos_2_119440182_119445898_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

119440182 - 119445898

Intron Length:

5717

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAAAAGTG

5'SS Class:

strong_major

3'SS Sequence:

GTATTCTTTTTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTGGTAT

U12 Branch Point Sequence:

TTTACTCGAACT

Flanking Amino Acid:

LYEMYFKDPQGRVIKGSYKF

Intron Amino Acid Position:

1070

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

81.6

0.74

0.9

72.3

37.6

Major BPS

56.4

0.16

1.6

57.4

49.1

Major PPT

79.7

0.67

0.8

77.8

36.3

Minor 5ss

33.4

-1.9

3.6

46.6

48.7

Minor BPS

58.5

0.35

1.8

82.73

37.9

Associated Gene:

Gene:

CHD7

Ensembl Gene ID:

ENSAPLG00000005873

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000006263

119349278 - 119475485

126208