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Intron Name: Anas_platyrhynchos_platyrhynchos_2_119455939_119456637_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

119455939 - 119456637

Intron Length:

699

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GGG|GTAAGAATT

5'SS Class:

strong_major

3'SS Sequence:

TTATATGTTACAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CTCTTAT

U12 Branch Point Sequence:

CCTCTCTTATAT

Flanking Amino Acid:

MSGRENATNGVQQLSKKEIE

Intron Amino Acid Position:

1454

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

85.4

0.83

0.9

84.6

33.3

Major BPS

79.1

0.72

69.3

38.4

Major PPT

0.65

72.6

41.9

Minor 5ss

-1.2

3.1

50.4

45.6

Minor BPS

49.8

0.07

1.7

65.88

44.7

Associated Gene:

Gene:

CHD7

Ensembl Gene ID:

ENSAPLG00000005873

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000006263

119349278 - 119475485

126208