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Intron Name: Anas_platyrhynchos_platyrhynchos_2_119457210_119457293_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

119457210 - 119457293

Intron Length:

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AGG|GTAAGAGCT

5'SS Class:

strong_major

3'SS Sequence:

GCTTTCATTTTAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTACAT

U12 Branch Point Sequence:

TCCTCCTAAATT

Flanking Amino Acid:

ELDIDALNGRNNLVIDTPRV

Intron Amino Acid Position:

1551

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

81.9

0.75

72.5

37.3

Major BPS

82.7

0.81

0.9

89.3

26.1

Major PPT

77.1

0.61

0.8

74.5

Minor 5ss

32.6

-2

3.4

40.6

45.1

Minor BPS

67.5

0.63

1.7

79.08

43.9

Associated Gene:

Gene:

CHD7

Ensembl Gene ID:

ENSAPLG00000005873

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000006263

119349278 - 119475485

126208