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Intron Name: Anas_platyrhynchos_platyrhynchos_2_119458633_119459229_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

119458633 - 119459229

Intron Length:

597

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CCG|GTATGTCTA

5'SS Class:

major

3'SS Sequence:

GGCATTTGTGTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TATAAAA

U12 Branch Point Sequence:

TGTATAAAAAAT

Flanking Amino Acid:

GQTRALVNHSGLSAPVPRGR

Intron Amino Acid Position:

1686

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

78.9

0.68

40.7

Major BPS

65.3

0.38

71.6

30.1

Major PPT

63.1

0.3

57.5

43.1

Minor 5ss

44.4

-0.6

2.8

59.1

45.4

Minor BPS

40.4

-0.6

2.1

60.94

41.9

Associated Gene:

Gene:

CHD7

Ensembl Gene ID:

ENSAPLG00000005873

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000006263

119349278 - 119475485

126208