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Intron Name: Anas_platyrhynchos_platyrhynchos_2_119462853_119463352_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

119462853 - 119463352

Intron Length:

500

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTTAGTGCA

5'SS Class:

strong_major

3'SS Sequence:

GCTGTCTTTGCAG|T

3'SS Class:

major_PPT

U2 Branch Point Sequence:

GTATAAT

U12 Branch Point Sequence:

TTTTTGAGAATG

Flanking Amino Acid:

ADKILEGADSSEVDVWIPEP

Intron Amino Acid Position:

1769

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

83.2

0.78

1.1

76.2

32.9

Major BPS

70.1

0.5

1.3

72.3

40.4

Major PPT

79.4

0.66

0.9

72.7

37.5

Minor 5ss

29.3

-2.4

2.9

33.7

41.5

Minor BPS

44.8

-0.5

2.3

60.59

41.6

Associated Gene:

Gene:

CHD7

Ensembl Gene ID:

ENSAPLG00000005873

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000006263

119349278 - 119475485

126208