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Intron Name: Anas_platyrhynchos_platyrhynchos_2_119463457_119464884_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

119463457 - 119464884

Intron Length:

1428

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ACG|GTAAGTGAT

5'SS Class:

strong_major

3'SS Sequence:

ACTCTACATGCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTACAA

U12 Branch Point Sequence:

TTTACAAAAAAA

Flanking Amino Acid:

KSLLIGVFKHGYEKYNSMRA

Intron Amino Acid Position:

1804

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.9

81.8

31.8

Major BPS

73.5

0.59

81.3

29.9

Major PPT

70.1

0.45

63.3

36.9

Minor 5ss

34.8

-1.7

3.3

49.9

46.4

Minor BPS

44.1

-0.4

2.2

64.08

41.3

Associated Gene:

Gene:

CHD7

Ensembl Gene ID:

ENSAPLG00000005873

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000006263

119349278 - 119475485

126208