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Intron Name: Anas_platyrhynchos_platyrhynchos_2_119467785_119468195_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

119467785 - 119468195

Intron Length:

411

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAACTCAC

5'SS Class:

strong_major

3'SS Sequence:

GATTGTTATTCAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTGTTAT

U12 Branch Point Sequence:

TAGTAGTTAATG

Flanking Amino Acid:

DKSEESSQPEAGAVSQGKNF

Intron Amino Acid Position:

2262

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.73

1.1

72.3

39.5

Major BPS

81.3

0.78

1.1

71.7

44.6

Major PPT

73.6

0.53

70.2

44.6

Minor 5ss

40.1

-1.1

2.9

52.9

44.3

Minor BPS

48.4

-0.2

2.2

57.32

44.4

Associated Gene:

Gene:

CHD7

Ensembl Gene ID:

ENSAPLG00000005873

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000006263

119349278 - 119475485

126208