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Intron Name: Anas_platyrhynchos_platyrhynchos_2_119470922_119471517_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

119470922 - 119471517

Intron Length:

596

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GTA|GTAAGACAG

5'SS Class:

major

3'SS Sequence:

TTAATGTTTTCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TGTTAAT

U12 Branch Point Sequence:

TGAGACTTAATA

Flanking Amino Acid:

MSNKRTSLTVEDAEVTKAFE

Intron Amino Acid Position:

2464

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

70.6

0.49

Major BPS

84.4

0.85

34.5

Major PPT

80.3

0.68

0.9

77.2

41.6

Minor 5ss

33.2

-1.9

3.1

41.1

40.2

Minor BPS

59.1

0.28

1.6

66.12

40.2

Associated Gene:

Gene:

CHD7

Ensembl Gene ID:

ENSAPLG00000005873

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000006263

119349278 - 119475485

126208