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Intron Name: Anas_platyrhynchos_platyrhynchos_2_119472833_119473595_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

119472833 - 119473595

Intron Length:

763

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TCT|GTAAGTGAA

5'SS Class:

major

3'SS Sequence:

ATCCCCTTTTCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

AATAAAA

U12 Branch Point Sequence:

TTTTCCTGCATC

Flanking Amino Acid:

PDWTDIVKQSGFVPESMFDR

Intron Amino Acid Position:

2620

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

75.1

0.59

1.1

34.7

Major BPS

56.5

0.16

0.9

63.3

29.1

Major PPT

80.3

0.68

0.8

30.9

Minor 5ss

34.9

-1.7

3.3

49.9

46.4

Minor BPS

63.7

0.41

1.9

79.19

36.3

Associated Gene:

Gene:

CHD7

Ensembl Gene ID:

ENSAPLG00000005873

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000006263

119349278 - 119475485

126208