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Intron Name: Anas_platyrhynchos_platyrhynchos_2_119697022_119745258_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

119697022 - 119745258

Intron Length:

48237

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAGGTGGT

5'SS Class:

strong_major

3'SS Sequence:

TTTCTTTCTGTAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TATTAAC

U12 Branch Point Sequence:

CATCTATTAACT

Flanking Amino Acid:

ILKLAIEGLQDSFPARFGGV

Intron Amino Acid Position:

189

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

85.8

0.84

76.2

39.9

Major BPS

81.9

0.79

0.8

81.9

Major PPT

88.3

0.86

0.6

85.2

22.2

Minor 5ss

-1.9

3.5

49.2

47.1

Minor BPS

61.3

0.43

1.6

75.68

40.5

Associated Gene:

Gene:

CLVS1

Ensembl Gene ID:

ENSAPLG00000006781

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000036331

119668100 - 119746796

78697

ENSAPLT00000007027

119668100 - 119760571

92472