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Intron Name: Anas_platyrhynchos_platyrhynchos_2_119745370_119746457_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

119745370 - 119746457

Intron Length:

1088

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AGG|GTAATTAGA

5'SS Class:

major

3'SS Sequence:

TTATTTCTTAAAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTTAT

U12 Branch Point Sequence:

TATTTCTTAAAG

Flanking Amino Acid:

PFLKDKTRKRIFLHGNNLNS

Intron Amino Acid Position:

226

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

76.4

0.62

1.1

70.8

41.1

Major BPS

96.5

1.15

0.6

34.2

Major PPT

77.8

0.63

79.1

33.1

Minor 5ss

34.7

-1.7

2.6

34.2

41.1

Minor BPS

72.9

0.58

1.4

73.75

38.1

Associated Gene:

Gene:

CLVS1

Ensembl Gene ID:

ENSAPLG00000006781

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000036331

119668100 - 119746796

78697

ENSAPLT00000007027

119668100 - 119760571

92472